feat(auth): give the secrets file a real cross-process lock (#2082)

#1950 shipped FileSecretStore without cross-process mutual exclusion, by
decision: an earlier revision hand-rolled a `mkdir` election with an owner
stamp, a heartbeat and a stale-takeover, and three consecutive review rounds
found a real race in it. The last one is not closable with what Node exposes
— claiming a stale lock atomically needs compare-and-swap on a directory
entry (`renameat2(RENAME_EXCHANGE)`) — so it was replaced with optimistic
verify-and-retry and the residual documented.

#2082 settles that as "borrow, don't hand-roll". `proper-lockfile` is what
npm itself locks with, and stale-takeover is precisely the problem it has
already solved: it re-stats the lock directory after claiming it and gives
the lock up when the mtime is not the one it wrote, so the loser of a
takeover race releases instead of proceeding.

- core/auth/node/file-lock.ts: `withSecretFileLock`. `realpath: false` so a
  file can be locked into existence (the very first `set` has no
  `secrets.json`, and the library's default resolves through `fs.realpath`);
  a warning in place of the library's `onCompromised`, which throws from a
  timer and would take the session down; and a degrade-with-one-warning path
  rather than a throw when no lock can be taken — this store exists for boxes
  missing the usual mechanism (#1848, #1905) and must not gain a new way to
  be unavailable.
- FileSecretStore.mutate holds it across the whole read-modify-write. The
  optimistic verify stays underneath and is not redundant: a lock is advisory
  between the processes that take it, so the verify covers a writer outside
  this codebase and covers the degrade path. The in-process queue stays too,
  and gains a second job — proper-lockfile is not reentrant, so serializing
  per path keeps ELOCKED meaning "another process".
- absorbFileSecretsIntoKeyring takes the same lock around orphan adoption and
  the atomic claim, behind a lock-free `readdir` fast path so the common
  startup (keychain available, no file ever written) neither creates a lock
  directory nor warns about one it could not create.

proper-lockfile is a root `dependency` per the placement rule, and is named
in all three bundler `external` lists: tsup externalizes what the *client's*
manifest declares, so a root-only CJS package was being inlined into the ESM
bundles, leaving esbuild's `Dynamic require of "path" is not supported` shim
that killed `--cli` at import time. That rule was undocumented; it is now in
AGENTS.md beside the placement rule that creates it, and mirrored into
.github/copilot-instructions.md.

Tests: 7 new in file-lock.test.ts driving a real second process (the existing
suite structurally cannot — `serialize` orders in-process callers before the
lock sees them), plus two for the migration fast path.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01JTHVxSu8AUgHRLvo1ntZ8H
Signed-off-by: cliffhall <cliff@futurescale.com>

README.md

@@ -502,9 +502,11 @@ Setting the passphrase later is safe — the next write upgrades an existing pla
 
 The Inspector writes the file `0600` and re-tightens it at startup if something loosened it. If it _cannot_ — the file belongs to another user, or the mount is read-only — it says so in the log rather than continuing to describe the file as protected, since on that box the mode claim above is not true.
 
-**Two Inspectors, one file.** Within a process, mutations are serialized per file path, so a web session's own concurrent saves cannot lose each other. Across processes — a CLI run beside a web session — there is deliberately **no lock**: writers are allowed to collide and the loser is made to notice. Each mutation reads the file, applies its change, writes, then reads back and compares the whole map; if another process wrote in between, it re-applies onto what they left and retries, and after five lost rounds it fails loudly rather than returning as though the value were saved.
+**Two Inspectors, one file.** Within a process, mutations are serialized per file path, so a web session's own concurrent saves cannot lose each other. Across processes — a CLI run beside a web session — each mutation takes an exclusive lock on `secrets.json.lock` for the whole read-modify-write, using [`proper-lockfile`](https://github.com/moxystudio/node-proper-lockfile) (the same library npm itself locks with). The lock expires 10 seconds after its holder stops refreshing it, so an Inspector that is killed mid-save does not leave the file unwritable.
 
-This is **not mutual exclusion**, and the residual case is worth stating: the verify only catches a clobber that has already landed, so if one Inspector reads back *before* the other's write arrives, both report success and one value is gone. That needs two Inspectors writing the same file within the gap between one's write and its read-back — narrow, but not only a crash. An earlier build did take a lock (`secrets.json.lock`); it was removed because making a `mkdir` lock single-winner on a stale takeover needs a compare-and-swap on a directory entry that Node does not expose, so it had the same class of failure with several hundred more lines and no way to close it.
+Underneath the lock, each mutation still reads the file, applies its change, writes, then reads back and compares the whole map; if something wrote in between it re-applies onto what was left and retries, failing loudly after five lost rounds rather than returning as though the value were saved. That check is not redundant with the lock — a lock only orders the writers that *take* it, so it covers an editor, a restored backup, or an Inspector older than this release.
+
+It is also what covers the lock being unavailable. This store exists for boxes where the usual mechanism isn't there, so a directory that can't hold a lock file — a read-only `$HOME`, a mount owned by another uid — makes the save proceed unlocked with a warning, rather than turning every `set` into a failure on exactly the deployments the store was written for.
 
 Three env vars affect where the file lands. `MCP_INSPECTOR_SECRET_STORE=keyring|file|memory` picks the store outright, bypassing the probe. `MCP_INSPECTOR_SECRET_FILE` names the file. Failing both, the file follows `MCP_STORAGE_DIR` — the same variable that relocates OAuth tokens and `client.json` — so mounting a volume at your configured storage directory is enough to make secrets durable there.