Remove package_canonical (#59)
I originally introduced `package_canonical` into the API schema because, at the time, we were thinking to "pin" the version of the MCP server to _one_ of the referenced source code packages. We are no longer doing this (we are maintaining a separate notion of `version` unique to the MCP server), so I don't believe `package_canonical` is needed anymore. Does anyone see otherwise? This change removes all mentions in READMEs and usages in code.
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